Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43622.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
AMS43623.1
Pfam:pfam01322 Cytochrome C'.
 
   
 0.915
AMS41334.1
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.858
AMS41333.1
Ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.835
AMS43162.1
Twin-arginine translocation pathway signal; Pfam:pfam00355 Rieske [2Fe-2S] domain.
  
 
 0.835
AMS43972.1
Nitric oxide reductase; Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I.
  
 
 0.745
AMS41989.1
(Fe-S)-binding protein; Pfam:pfam13247 4Fe-4S dicluster domain.
  
 
 0.727
AMS39756.1
Peptidase S41; Pfam:pfam02433 Cytochrome C oxidase, mono-heme subunit/FixO.
  
 
 0.723
AMS43898.1
Pfam:pfam02433 Cytochrome C oxidase, mono-heme subunit/FixO.
  
 
 0.723
nuoB
NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.711
AMS39757.1
Peptidase S41; Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.707
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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