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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43636.1Choline-sulfatase; Pfam:pfam00884 Sulfatase. (509 aa)    
Predicted Functional Partners:
betI-2
BetI family transcriptional regulator; Repressor involved in choline regulation of the bet genes.
 
   
 0.835
betA
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
     
 0.793
AMS43637.1
Pyridoxal-5-phosphate-dependent protein subunit beta; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme.
  
    0.775
AMS43633.1
Short-chain dehydrogenase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
 
 0.680
betB
4-trimethylaminobutyraldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.
  
  
 0.641
AMS40963.1
PTS galactitol transporter subunit IIC; Pfam:pfam03611 PTS system sugar-specific permease component.
   
    0.599
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
  
 0.593
AMS43039.1
Serine/threonine protein phosphatase; Pfam:pfam03781 Sulfatase-modifying factor enzyme 1.
 
   0.523
AMS43033.1
Serine/threonine protein phosphatase; Pfam:pfam03781 Sulfatase-modifying factor enzyme 1.
 
   0.521
AMS43634.1
acetyl-CoA acetyltransferase; Pfam:pfam02803 Thiolase, C-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.508
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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