Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS43642.1Signal peptide protein; Pfam:pfam07811 TadE-like protein. (204 aa)    
Predicted Functional Partners:
AMS43643.1
Hypothetical protein.
 
    0.965
AMS40376.1
ATPase.
  
     0.686
AMS44398.1
CtpF protein; Pfam:pfam13614 AAA domain.
 
  
 0.682
AMS44401.1
Flp pilus assembly protein CpaB.
 
  
 0.643
AMS44396.1
Pilus assembly protein; Pfam:pfam00482 Type II secretion system (T2SS), protein F.
 
  
 0.619
AMS39324.1
Pilus assembly protein; Pfam:pfam13614 AAA domain.
  
  
 0.618
AMS39330.1
Flp pilus assembly protein CpaB.
  
  
 0.589
AMS39321.1
Pilus assembly protein TadB; Pfam:pfam00482 Type II secretion system (T2SS), protein F.
  
  
 0.564
AMS42987.1
Hypothetical protein.
  
     0.557
AMS44404.1
Pfam:pfam13629 Pilus formation protein N terminal region.
 
  
 0.529
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.