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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43677.1Beta-lactamase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. (361 aa)    
Predicted Functional Partners:
AMS43676.1
Biotin biosynthesis protein BioY; Pfam:pfam02632 BioY family.
       0.586
AMS42779.1
Hypothetical protein.
 
   
 0.561
AMS39441.1
Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.546
AMS40219.1
Carnitine dehydratase; Pfam:pfam02515 CoA-transferase family III; Belongs to the CoA-transferase III family.
 
    0.522
AMS41065.1
Ferredoxin reductase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.519
AMS39495.1
Pfam:pfam06319 Protein of unknown function (DUF1052).
  
     0.498
AMS43099.1
N-methylproline demethylase; Pfam:pfam00724 NADH:flavin oxidoreductase / NADH oxidase family.
  
 0.424
AMS43108.1
Pfam:pfam09866 Uncharacterized protein conserved in bacteria (DUF2093).
  
     0.424
AMS40885.1
Sarcosine oxidase subunit alpha; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
  
 0.417
AMS41906.1
(2Fe-2S)-binding protein; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
  
 0.417
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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