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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43679.1Long-chain fatty acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme. (545 aa)    
Predicted Functional Partners:
AMS42572.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 
 0.803
AMS44233.1
Pfam:pfam12806 Acetyl-CoA dehydrogenase C-terminal like.
 
 
 0.679
AMS42571.1
Pfam:pfam01636 Phosphotransferase enzyme family.
 
 
 0.672
AMS42575.1
Hypothetical protein; Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 
 
 0.664
AMS44230.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 
 
 0.659
AMS43774.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 
 0.654
AMS42559.1
Hypothetical protein; Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 
 0.648
AMS44232.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 
 0.642
AMS42599.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
 
 
 0.631
AMS42598.1
Hypothetical protein; Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 
 0.624
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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