STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43681.1Hypothetical protein; Pfam:pfam01522 Polysaccharide deacetylase. (245 aa)    
Predicted Functional Partners:
AMS43808.1
Polysaccharide deacetylase.
 
     0.487
AMS39996.1
Pfam:pfam00535 Glycosyl transferase family 2.
 
  
 0.484
AMS39995.1
Succinoglycan biosynthesis protein exoa; Pfam:pfam00535 Glycosyl transferase family 2.
  
  
 0.483
AMS43608.1
Hypothetical protein; Pfam:pfam01471 Putative peptidoglycan binding domain.
 
     0.477
AMS43682.1
Pyruvate phosphate dikinase; Pfam:pfam02896 PEP-utilizing enzyme, TIM barrel domain; Belongs to the PEP-utilizing enzyme family.
     
 0.471
AMS41632.1
Hypothetical protein.
  
  
 0.450
AMS43069.1
Protein ndvB; Pfam:pfam10091 Putative glucoamylase.
  
  
 0.443
AMS43629.1
AbrB family transcriptional regulator; Pfam:pfam04014 Antidote-toxin recognition MazE.
  
     0.441
AMS42283.1
Hypothetical protein; Pfam:pfam06568 Domain of unknown function (DUF1127).
  
     0.404
AMS40715.1
Hypothetical protein.
  
  
 0.403
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.