STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43688.1Putative enzyme; Pfam:pfam03308 ArgK protein. (332 aa)    
Predicted Functional Partners:
AMS39762.1
Pfam:pfam01642 Methylmalonyl-CoA mutase.
  
 0.997
AMS43689.1
Methylmalonyl-CoA mutase, large subunit; Pfam:pfam01642 Methylmalonyl-CoA mutase.
  
 0.997
AMS43687.1
methylmalonyl-CoA mutase; Pfam:pfam02310 B12 binding domain.
  
 0.990
AMS41868.1
methylmalonyl-CoA epimerase; Pfam:pfam13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
  
 0.812
AMS43690.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.810
AMS43691.1
Ligase; Pfam:pfam00501 AMP-binding enzyme.
     
 0.767
AMS43686.1
2,2-dialkylglycine decarboxylase; Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.737
AMS39765.1
methylmalonyl-CoA carboxyltransferase; Pfam:pfam01039 Carboxyl transferase domain.
 
   
 0.675
AMS43692.1
Helix-turn-helix-domain containing protein AraC type; Pfam:pfam12625 Arabinose-binding domain of AraC transcription regulator, N-term.
  
    0.671
AMS42084.1
XdhC/CoxI family protein; Pfam:pfam02625 XdhC and CoxI family.
 
      0.617
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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