Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43691.1Ligase; Pfam:pfam00501 AMP-binding enzyme. (541 aa)    
Predicted Functional Partners:
AMS43690.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.862
AMS43688.1
Putative enzyme; Pfam:pfam03308 ArgK protein.
     
 0.765
AMS43687.1
methylmalonyl-CoA mutase; Pfam:pfam02310 B12 binding domain.
       0.757
AMS43689.1
Methylmalonyl-CoA mutase, large subunit; Pfam:pfam01642 Methylmalonyl-CoA mutase.
       0.757
AMS43686.1
2,2-dialkylglycine decarboxylase; Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.740
AMS39120.1
Acyl-CoA synthetase; Pfam:pfam00501 AMP-binding enzyme.
  
     0.708
AMS43692.1
Helix-turn-helix-domain containing protein AraC type; Pfam:pfam12625 Arabinose-binding domain of AraC transcription regulator, N-term.
       0.678
AMS41485.1
AMP-dependent synthetase and ligase; Pfam:pfam00501 AMP-binding enzyme.
 
   
 0.658
AMS43694.1
acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.551
AMS43693.1
Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.548
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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