Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43712.1Chemotaxis protein CheY; Pfam:pfam03861 ANTAR domain. (226 aa)    
Predicted Functional Partners:
AMS43711.1
Putative nitrate transporter component, nrtA; Pfam:pfam13379 NMT1-like family.
 
  
 0.972
AMS43708.1
Assimilatory nitrite reductase (NAD(P)H) small subunit; Pfam:pfam13806 Rieske-like [2Fe-2S] domain.
 
  
 0.905
AMS43709.1
Nitrite reductase (NAD(P)H), large subunit; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.901
AMS43707.1
Nitrate reductase; Pfam:pfam00384 Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.891
AMS43713.1
Acriflavine resistance protein B; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.664
AMS43714.1
RND transporter MFP subunit; Pfam:pfam13437 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.664
AMS43710.1
Nitrate/nitrite transporter protein; Pfam:pfam07690 Major Facilitator Superfamily.
 
  
 0.660
ndoA
MocE; Pfam:pfam00355 Rieske [2Fe-2S] domain.
 
  
 0.565
AMS39955.1
Ammonia channel protein; Pfam:pfam00909 Ammonium Transporter Family.
  
  
 0.542
AMS39614.1
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
  
    0.482
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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