Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43732.1Hypothetical protein; Pfam:pfam13302 Acetyltransferase (GNAT) domain. (198 aa)    
Predicted Functional Partners:
AMS43733.1
Diguanylate cyclase; Pfam:pfam00563 EAL domain.
     
 0.847
AMS43731.1
Peptidase M16; Pfam:pfam00675 Insulinase (Peptidase family M16); Belongs to the peptidase M16 family.
  
    0.821
AMS43730.1
Pfam:pfam14821 Threonine synthase N terminus.
       0.790
AMS43729.1
Hypothetical protein.
       0.578
AMS44331.1
ATPase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.495
AMS44143.1
Pfam:pfam11164 Protein of unknown function (DUF2948).
  
     0.483
AMS43491.1
Hydrolase; Pfam:pfam13023 HD domain.
 
   
 0.479
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.474
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
    0.460
AMS39497.1
ATPase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.440
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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