STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43741.1Pfam:pfam06170 Protein of unknown function (DUF983). (128 aa)    
Predicted Functional Partners:
AMS43740.1
Hypothetical protein; Pfam:pfam02104 SURF1 family.
 
     0.862
ctaG
Cytochrome C oxidase assembly protein; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
     0.812
AMS43742.1
ErfK/YbiS/YcfS/YnhG family protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
       0.787
AMS39170.1
Pfam:pfam10003 Integral membrane protein (DUF2244).
  
     0.723
AMS43743.1
Pfam:pfam00510 Cytochrome c oxidase subunit III.
 
     0.695
AMS44145.1
Pfam:pfam06793 Uncharacterized protein family (UPF0262); Belongs to the UPF0262 family.
 
   
 0.664
AMS43745.1
Protein CoxF.
 
     0.653
AMS41241.1
Pfam:pfam06627 Protein of unknown function (DUF1153).
  
     0.651
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
     0.642
AMS39495.1
Pfam:pfam06319 Protein of unknown function (DUF1052).
  
   
 0.631
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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