Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43755.1Pirin; Pfam:pfam02678 Pirin; Belongs to the pirin family. (306 aa)    
Predicted Functional Partners:
AMS42816.1
Extradiol ring-cleavage dioxygenase; Pfam:pfam02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase.
 
  
 0.678
AMS43756.1
Hypothetical protein; Pfam:pfam10041 Uncharacterized conserved protein (DUF2277).
       0.633
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.625
AMS41010.1
Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
    0.447
AMS43752.1
Hypothetical protein; Pfam:pfam05958 tRNA (Uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.447
AMS43753.1
Hemolysin; Pfam:pfam01728 FtsJ-like methyltransferase.
       0.447
AMS42838.1
3-beta hydroxysteroid dehydrogenase; Pfam:pfam13460 NADH(P)-binding.
 
  
 0.441
AMS43757.1
Hypothetical protein; Pfam:pfam01124 MAPEG family.
       0.412
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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