STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43756.1Hypothetical protein; Pfam:pfam10041 Uncharacterized conserved protein (DUF2277). (88 aa)    
Predicted Functional Partners:
AMS43755.1
Pirin; Pfam:pfam02678 Pirin; Belongs to the pirin family.
       0.633
AMS43428.1
TetR family transcriptional regulator; Pfam:pfam02909 Tetracyclin repressor, C-terminal all-alpha domain.
  
     0.578
AMS44296.1
Glyoxalase; Pfam:pfam12681 Glyoxalase-like domain.
  
     0.567
AMS42353.1
Acetyltransferase.
  
     0.543
AMS43757.1
Hypothetical protein; Pfam:pfam01124 MAPEG family.
       0.497
AMS39813.1
RNA polymerase, sigma-24 subunit, ECF subfamily; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family.
  
     0.464
AMS44059.1
Hypothetical protein.
 
     0.444
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.437
AMS39933.1
Hypothetical protein; Pfam:pfam01047 MarR family.
  
     0.432
AMS40144.1
Nuclease; Pfam:pfam13087 AAA domain.
 
     0.404
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.