Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS43783.1Hypothetical protein. (127 aa)    
Predicted Functional Partners:
AMS42053.1
Hypothetical protein.
  
     0.583
AMS43782.1
Hypothetical protein.
       0.563
AMS42793.1
Kinesin.
  
     0.543
AMS41809.1
Glutamate synthase; Pfam:pfam01494 FAD binding domain.
  
     0.538
AMS42407.1
Hypothetical protein.
  
    0.534
AMS39425.1
Hypothetical protein.
  
     0.530
AMS40609.1
(2Fe-2S)-binding protein.
  
     0.493
AMS41525.1
Glutathione S-transferase-like protein; Pfam:pfam13417 Glutathione S-transferase, N-terminal domain.
  
     0.469
AMS40608.1
Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenase, large terminal subunit.
  
     0.463
AMS39649.1
Hypothetical protein; Pfam:pfam07478 D-ala D-ala ligase C-terminus.
  
     0.457
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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