Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43791.1Pfam:pfam01343 Peptidase family S49. (287 aa)    
Predicted Functional Partners:
AMS43789.1
Hypothetical protein; Pfam:pfam09413 Domain of unknown function (DUF2007).
 
     0.728
AMS43792.1
Membrane protein.
       0.699
ispE
Hypothetical protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.692
AMS43790.1
Hypothetical protein; Pfam:pfam05175 Methyltransferase small domain; Belongs to the methyltransferase superfamily.
       0.625
AMS43794.1
Molybdopterin biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.
  
    0.584
AMS39978.1
EcaC; Pfam:pfam14534 Domain of unknown function (DUF4440).
  
     0.467
AMS40392.1
FMN reductase; Pfam:pfam03358 NADPH-dependent FMN reductase.
 
     0.437
AMS43788.1
Pfam:pfam00348 Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.429
AMS43787.1
Tetratricopeptide TPR_1 repeat-containing protein; Pfam:pfam13414 TPR repeat.
  
  
 0.412
AMS39132.1
Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
  
   
 0.411
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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