Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43804.1ATP-binding protein; Pfam:pfam07486 Cell Wall Hydrolase. (395 aa)    
Predicted Functional Partners:
AMS40709.1
Hypothetical protein; Pfam:pfam13480 Acetyltransferase (GNAT) domain.
  
     0.589
AMS43806.1
Membrane protein; Pfam:pfam09976 Tetratricopeptide repeat.
 
     0.584
der
GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.571
AMS43779.1
Hypothetical protein.
  
     0.547
AMS42793.1
Kinesin.
 
     0.546
AMS43803.1
Hypothetical protein; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.
 
     0.538
AMS41015.1
Hypothetical protein; Pfam:pfam02120 Flagellar hook-length control protein FliK.
  
     0.536
AMS42795.1
Organic solvent ABC transporter substrate-binding protein; Pfam:pfam02470 mce related protein.
  
     0.504
AMS41768.1
Pfam:pfam13502 AsmA-like C-terminal region.
  
   
 0.484
AMS39726.1
Pfam:pfam07182 Protein of unknown function (DUF1402).
  
   
 0.467
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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