STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43813.1Pfam:pfam03960 ArsC family; Belongs to the ArsC family. (116 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.674
AMS40649.1
Pfam:pfam01323 DSBA-like thioredoxin domain.
   
 
 0.670
AMS42621.1
Hypothetical protein; Pfam:pfam01323 DSBA-like thioredoxin domain.
   
 
 0.670
AMS39896.1
FMN reductase; Pfam:pfam03358 NADPH-dependent FMN reductase.
 
  
 0.662
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.634
AMS43814.1
Pfam:pfam01042 Endoribonuclease L-PSP.
  
    0.595
AMS43815.1
Hypothetical protein; Pfam:pfam08450 SMP-30/Gluconolaconase/LRE-like region.
  
    0.595
AMS43816.1
Hypothetical protein; Pfam:pfam00155 Aminotransferase class I and II.
       0.581
AMS43817.1
Hypothetical protein; Pfam:pfam04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus.
       0.530
AMS44212.1
Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.
 
   
 0.437
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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