Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
slyA_7Hypothetical protein; Pfam:pfam12802 MarR family. (147 aa)    
Predicted Functional Partners:
AMS40182.1
Pfam:pfam01047 MarR family.
  
     0.752
AMS40841.1
Pfam:pfam01047 MarR family.
  
     0.636
AMS43818.1
LysR family transcriptional regulator; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
    0.517
AMS39569.1
Pfam:pfam01047 MarR family.
  
     0.468
AMS43129.1
Membrane protein; Pfam:pfam00529 HlyD family secretion protein.
 
  
 0.422
AMS43128.1
DSBA oxidoreductase; Pfam:pfam07690 Major Facilitator Superfamily.
 
   
 0.406
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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