STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43821.1Transcriptional regulator; Pfam:pfam07729 FCD domain. (229 aa)    
Predicted Functional Partners:
AMS40072.1
AsnC family transcriptional regulator; Pfam:pfam07729 FCD domain.
  
     0.764
AMS39575.1
Hypothetical protein; Pfam:pfam07729 FCD domain.
  
     0.739
AMS39524.1
Putative DNA-binding transcriptional regulator, GntR family; Pfam:pfam07729 FCD domain.
  
     0.721
AMS40129.1
Pfam:pfam07729 FCD domain.
 
  
 0.703
AMS40259.1
Pfam:pfam00392 Bacterial regulatory proteins, gntR family.
  
     0.698
AMS40106.1
Hypothetical protein; Pfam:pfam07729 FCD domain.
 
  
 0.634
AMS43858.1
GntR domain protein; Pfam:pfam07729 FCD domain.
 
  
 0.615
AMS40053.1
Pfam:pfam01177 Asp/Glu/Hydantoin racemase.
 
     0.590
AMS43822.1
Amidohydrolase; Pfam:pfam01979 Amidohydrolase family.
       0.560
AMS39530.1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
 
  
 0.540
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.