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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43842.1Transcriptional regulator; Pfam:pfam07883 Cupin domain. (200 aa)    
Predicted Functional Partners:
AMS42948.1
UDP-phosphate glucose phosphotransferase; Pfam:pfam02397 Bacterial sugar transferase.
  
  
 0.804
AMS41898.1
XRE family transcriptional regulator; Pfam:pfam12844 Helix-turn-helix domain.
 
 
 0.754
AMS41122.1
Transcriptional regulator, XRE family; Pfam:pfam01381 Helix-turn-helix.
  
   
 0.553
AMS43827.1
Pfam:pfam00202 Aminotransferase class-III.
  
  
 0.487
AMS42918.1
Hypothetical protein; Pfam:pfam07883 Cupin domain.
 
 
0.472
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.434
AMS40222.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.404
AMS44197.1
Histidine kinase; Pfam:pfam12860 PAS fold.
 
   
 0.403
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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