STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43858.1GntR domain protein; Pfam:pfam07729 FCD domain. (247 aa)    
Predicted Functional Partners:
AMS40779.1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
  
  
 0.763
mcbR_1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
  
  
 0.761
AMS40072.1
AsnC family transcriptional regulator; Pfam:pfam07729 FCD domain.
  
  
 0.759
AMS40028.1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
  
  
 0.752
AMS43859.1
Galactonate dehydratase; Pfam:pfam13378 Enolase C-terminal domain-like.
    
 0.739
AMS43932.1
Hypothetical protein; Pfam:pfam00392 Bacterial regulatory proteins, gntR family.
  
  
 0.717
AMS40062.1
Transcriptional regulator, GntR family; Pfam:pfam07729 FCD domain.
  
  
 0.712
AMS39556.1
Hypothetical protein; Pfam:pfam07729 FCD domain.
  
  
 0.707
AMS39575.1
Hypothetical protein; Pfam:pfam07729 FCD domain.
  
  
 0.693
AMS40934.1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
  
  
 0.654
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.