STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43859.1Galactonate dehydratase; Pfam:pfam13378 Enolase C-terminal domain-like. (382 aa)    
Predicted Functional Partners:
AMS43852.1
2-dehydro-3-deoxygalactonokinase; Pfam:pfam05035 2-keto-3-deoxy-galactonokinase.
 
 
 0.970
AMS39652.1
Hypothetical protein; Pfam:pfam05035 2-keto-3-deoxy-galactonokinase.
 
 
 0.957
AMS41418.1
Isomerase; Pfam:pfam13378 Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
 
0.919
AMS43851.1
Pfam:pfam01081 KDPG and KHG aldolase.
 
   
 0.750
AMS43858.1
GntR domain protein; Pfam:pfam07729 FCD domain.
    
 0.733
AMS43857.1
Sugar ABC transporter substrate-binding protein; Pfam:pfam00532 Periplasmic binding proteins and sugar binding domain of LacI family.
 
     0.630
AMS39651.1
Hypothetical protein; Pfam:pfam01081 KDPG and KHG aldolase.
 
   
 0.618
AMS43850.1
Gluconolaconase; Pfam:pfam08450 SMP-30/Gluconolaconase/LRE-like region.
 
  
 0.552
AMS43854.1
Pfam:pfam01263 Aldose 1-epimerase.
 
  
 0.531
AMS43853.1
Pfam:pfam00106 short chain dehydrogenase.
 
   
 0.456
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.