STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43867.1Lipoprotein, putative; Pfam:pfam13478 XdhC Rossmann domain. (348 aa)    
Predicted Functional Partners:
ubiX-2
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.773
AMS43869.1
Decarboxylase UbiD; Pfam:pfam01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Belongs to the UbiD family.
       0.773
AMS42024.1
Carbon monoxide dehydrogenase; Pfam:pfam01799 [2Fe-2S] binding domain.
 
  
 0.753
AMS40076.1
Carbon monoxide dehydrogenase; Pfam:pfam01799 [2Fe-2S] binding domain.
 
  
 0.746
AMS43874.1
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; Pfam:pfam01799 [2Fe-2S] binding domain.
 
  
 0.744
AMS42086.1
Hypothetical protein; Pfam:pfam12804 MobA-like NTP transferase domain.
 
  
 0.679
AMS40075.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; Pfam:pfam02738 Molybdopterin-binding domain of aldehyde dehydrogenase.
 
  
 0.670
AMS40077.1
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.
 
  
 0.663
AMS43875.1
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.
 
  
 0.644
AMS43873.1
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein; Pfam:pfam02738 Molybdopterin-binding domain of aldehyde dehydrogenase.
 
  
 0.643
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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