Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43879.1Pfam:pfam08028 Acyl-CoA dehydrogenase, C-terminal domain. (407 aa)    
Predicted Functional Partners:
AMS44230.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 0.928
AMS42575.1
Hypothetical protein; Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 0.863
AMS40420.1
Lipid-transfer protein.
 
 0.759
AMS43881.1
Pfam:pfam12697 Alpha/beta hydrolase family.
 
 0.753
AMS42600.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family.
 
 0.737
AMS40691.1
Pfam:pfam01012 Electron transfer flavoprotein domain.
  
 
 0.673
AMS40432.1
Hypothetical protein; Pfam:pfam00501 AMP-binding enzyme.
 
 
 0.632
AMS42594.1
Hypothetical protein; Pfam:pfam00501 AMP-binding enzyme.
 
 
 0.629
AMS42555.1
Hypothetical protein; Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family.
 
 0.624
AMS40690.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 0.609
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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