STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43882.1Cupin 2, conserved barrel domain protein; Pfam:pfam07883 Cupin domain. (147 aa)    
Predicted Functional Partners:
AMS40939.1
Monooxygenase; Pfam:pfam00743 Flavin-binding monooxygenase-like.
 
     0.752
AMS39570.1
Cyclase; Pfam:pfam04199 Putative cyclase.
 
    0.733
AMS39567.1
Indolepyruvate oxidoreductase subunit IorB II; Pfam:pfam01558 Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
     0.628
AMS43881.1
Pfam:pfam12697 Alpha/beta hydrolase family.
       0.625
AMS43880.1
FMN reductase; Pfam:pfam03358 NADPH-dependent FMN reductase.
  
    0.596
AMS43883.1
Pfam:pfam07690 Major Facilitator Superfamily.
 
     0.558
AMS39566.1
Indolepyruvate oxidoreductase subunit IorA; Pfam:pfam02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
  
     0.547
AMS40937.1
AraC family transcriptional regulator; Pfam:pfam14525 AraC-binding-like domain.
 
     0.544
AMS40809.1
NADPH dependend quinone reductase; Pfam:pfam05853 Prokaryotic protein of unknown function (DUF849).
  
    0.508
AMS44066.1
Hypothetical protein.
  
     0.500
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.