STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43883.1Pfam:pfam07690 Major Facilitator Superfamily. (424 aa)    
Predicted Functional Partners:
AMS43878.1
Hypothetical protein; Pfam:pfam00196 Bacterial regulatory proteins, luxR family.
 
  
 0.617
AMS43881.1
Pfam:pfam12697 Alpha/beta hydrolase family.
 
   
 0.601
AMS43882.1
Cupin 2, conserved barrel domain protein; Pfam:pfam07883 Cupin domain.
 
     0.558
AMS39655.1
Hypothetical protein.
  
     0.557
AMS43879.1
Pfam:pfam08028 Acyl-CoA dehydrogenase, C-terminal domain.
 
     0.505
AMS39433.1
Dehydrogenase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
    0.406
AMS40271.1
Membrane protein; Pfam:pfam07690 Major Facilitator Superfamily.
  
  
 0.406
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.