STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43889.1Hypothetical protein; Pfam:pfam00005 ABC transporter. (98 aa)    
Predicted Functional Partners:
AMS43942.1
Membrane protein; Pfam:pfam12679 ABC-2 family transporter protein.
  
 
 0.821
AMS43888.1
Pfam:pfam00589 Phage integrase family.
     
 0.617
AMS41694.1
Pfam:pfam01061 ABC-2 type transporter.
 
  
 0.607
AMS43946.1
Putative NosR; Pfam:pfam04205 FMN-binding domain.
  
  
 0.550
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.535
AMS43944.1
Pfam:pfam05048 Periplasmic copper-binding protein (NosD).
  
 
 0.534
AMS39027.1
Mannose-1-phosphate guanyltransferase; Pfam:pfam01061 ABC-2 type transporter.
  
  
 0.523
AMS43941.1
NosL copper chaperone; Pfam:pfam05573 NosL.
  
 
 0.509
atpA
F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
 
 0.504
nosZ
Hypothetical protein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
  
 
 0.503
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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