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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43914.1ATPase AAA; Pfam:pfam01695 IstB-like ATP binding protein. (150 aa)    
Predicted Functional Partners:
AMS43915.1
Transposase; Pfam:pfam00665 Integrase core domain.
 
  
 0.914
AMS40378.1
Pfam:pfam03796 DnaB-like helicase C terminal domain.
  
 
 0.843
AMS43454.1
DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.843
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.533
AMS39316.1
Transposase; Pfam:pfam03050 Transposase IS66 family.
 
     0.463
AMS39669.1
Pfam:pfam01757 Acyltransferase family.
  
    0.461
AMS44013.1
Hypothetical protein; Pfam:pfam03050 Transposase IS66 family.
 
     0.458
AMS44014.1
Transposase; Pfam:pfam05717 IS66 Orf2 like protein.
 
     0.440
AMS39318.1
Isocitrate lyase; Pfam:pfam05717 IS66 Orf2 like protein.
 
     0.429
AMS43916.1
Mobile element protein; Pfam:pfam01548 Transposase.
 
     0.417
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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