close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS43968.1Coproporphyrinogen III oxidase; Pfam:pfam04055 Radical SAM superfamily; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (450 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
 
 0.949
hemF
Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
    
 0.923
AMS39741.1
Membrane protein; Pfam:pfam03653 Uncharacterized protein family (UPF0093).
    
 0.912
AMS39931.1
Pfam:pfam03653 Uncharacterized protein family (UPF0093).
    
 0.912
AMS39760.1
Coproporphyrinogen III oxidase; Pfam:pfam04055 Radical SAM superfamily; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 
0.905
AMS43897.1
Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.799
AMS39757.1
Peptidase S41; Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.797
AMS43898.1
Pfam:pfam02433 Cytochrome C oxidase, mono-heme subunit/FixO.
 
  
 0.775
AMS39756.1
Peptidase S41; Pfam:pfam02433 Cytochrome C oxidase, mono-heme subunit/FixO.
 
  
 0.773
AMS39753.1
Nitrogen fixation protein fixG; Pfam:pfam11614 IG-like fold at C-terminal of FixG, putative oxidoreductase.
 
  
 0.768
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.