Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS43982.1DNA primase; Pfam:pfam01219 Prokaryotic diacylglycerol kinase. (361 aa)    
Predicted Functional Partners:
AMS43983.1
Pfam:pfam10686 Protein of unknown function (DUF2493).
 
     0.884
AMS44009.1
Pfam:pfam11000 Protein of unknown function (DUF2840).
  
     0.746
AMS44007.1
DNA binding domain, excisionase family; Pfam:pfam12728 Helix-turn-helix domain.
 
     0.745
AMS44016.1
Type VI secretion protein; Pfam:pfam11843 Protein of unknown function (DUF3363).
  
     0.744
AMS43986.1
Pfam:pfam05284 Protein of unknown function (DUF736).
  
     0.738
AMS44008.1
Pfam:pfam10134 Replication initiator protein A.
  
     0.735
AMS44010.1
Conjugal transfer protein; Pfam:pfam10502 Signal peptidase, peptidase S26.
  
     0.735
AMS44006.1
Hypothetical protein; Pfam:pfam10074 Uncharacterized conserved protein (DUF2285).
  
     0.713
AMS44011.1
Pfam:pfam05284 Protein of unknown function (DUF736).
  
     0.712
AMS44029.1
P-type conjugative transfer protein TrbG; Pfam:pfam03524 Conjugal transfer protein.
  
     0.685
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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