Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
AMS43986.1Pfam:pfam05284 Protein of unknown function (DUF736). (108 aa)    
Predicted Functional Partners:
AMS44010.1
Conjugal transfer protein; Pfam:pfam10502 Signal peptidase, peptidase S26.
 
     0.809
AMS44016.1
Type VI secretion protein; Pfam:pfam11843 Protein of unknown function (DUF3363).
 
     0.778
AMS44009.1
Pfam:pfam11000 Protein of unknown function (DUF2840).
 
     0.777
AMS44018.1
CopG family transcriptional regulator.
 
     0.776
AMS44017.1
Conjugal transfer protein TraG; Pfam:pfam02534 Type IV secretory system Conjugative DNA transfer.
 
     0.773
AMS44007.1
DNA binding domain, excisionase family; Pfam:pfam12728 Helix-turn-helix domain.
 
     0.772
AMS44025.1
Conjugal transfer protein TrbJ.
 
     0.765
AMS44023.1
Conjugal transfer protein TrbD; Pfam:pfam05101 Type IV secretory pathway, VirB3-like protein.
 
     0.763
AMS43983.1
Pfam:pfam10686 Protein of unknown function (DUF2493).
 
     0.759
AMS44027.1
Pfam:pfam04610 TrbL/VirB6 plasmid conjugal transfer protein.
 
     0.759
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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