STRINGSTRING
Rv3058c protein (Mycobacterium tuberculosis H37Rv) - STRING interaction network
"Rv3058c" - TetR family transcriptional regulator in Mycobacterium tuberculosis H37Rv
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rv3058cTetR family transcriptional regulator (216 aa)    
Predicted Functional Partners:
Rv0648
Alpha-mannosidase (1215 aa)
   
          0.715
Rv3057c
Short-chain dehydrogenase (287 aa)
              0.663
PPE64
PPE family protein (552 aa)
   
          0.654
cyp136
Cytochrome P450 (492 aa)
              0.635
ppe62
PPE family protein (582 aa)
   
          0.633
PPE53
PPE family protein (590 aa)
   
          0.611
Rv0613c
Hypothetical protein (855 aa)
   
          0.607
eccD5
Hypothetical protein; Part of the ESX-5 specialized secretion system, which is responsible for the secretion of EsxN and a number of PE_PGRS and PPE proteins, including PPE41 (503 aa)
   
          0.586
Rv3647c
Hypothetical protein (192 aa)
   
          0.557
Rv0227c
Hypothetical protein (421 aa)
   
          0.552
Your Current Organism:
Mycobacterium tuberculosis H37Rv
NCBI taxonomy Id: 83332
Other names: M. tuberculosis H37Rv, Mycobacterium tuberculosis H37Rv, Mycobacterium tuberculosis str. H37Rv, Mycobacterium tuberculosis strain H37Rv
Server load: low (12%) [HD]