STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfeYRpoE-regulated lipoprotein. (191 aa)    
Predicted Functional Partners:
yfeZ
Inner membrane protein.
       0.622
ypeA
GNAT family putative N-acetyltransferase; Belongs to the acetyltransferase family. YpeA subfamily.
       0.611
yfeX
Porphyrinogen oxidase, cytoplasmic; Has both general peroxidase activity and dye-decolorizing activity. Can catalyze the oxidation of both protoporphyrinogen IX and coproporphyrinogen III to their corresponding porphyrins. Also efficiently decolorizes the dyes alizarin red and Cibacron blue F3GA.
  
    0.598
yfeK
Uncharacterized protein.
   
    0.574
ygiM
SH3 domain protein.
   
    0.565
yaiW
Microcin Bac7 uptake protein; outer membrane surface-exposed lipoprotein.
   
  
 0.540
sixA
Phosphohistidine phosphatase; Exhibits phosphohistidine phosphatase activity towards the HPt domain of the ArcB sensor involved in the multistep His-Asp phosphorelay.
   
  
 0.481
ygdI
DUF903 family verified lipoprotein.
      
 0.459
blc
Outer membrane lipoprotein cell division and growth lipocalin; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids; Belongs to the calycin superfamily. Lipocalin family.
      
 0.456
yiiS
UPF0381 family protein; Belongs to the UPF0381 family.
      
 0.452
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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