STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yaeHPutative structural protein; Residues 1 to 128 of 128 are 100.00 pct identical to residues 1 to 128 of 128 from Escherichia coli K-12 Strain MG1655: B0163; Belongs to the UPF0325 family. (128 aa)    
Predicted Functional Partners:
ytfK
Hypothetical protein; Residues 1 to 81 of 81 are 100.00 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 Strain MG1655: B4217.
  
   
 0.760
eda
2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase; Residues 1 to 213 of 213 are 100.00 pct identical to residues 1 to 213 of 213 from Escherichia coli K-12 Strain MG1655: B1850.
      
 0.721
rpiA
Ribosephosphate isomerase, constitutive; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
      
 0.721
pepE
Peptidase E, a dipeptidase where amino-terminal residue is aspartate; Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids.
      
 0.721
yfgM
Orf, hypothetical protein; Residues 1 to 206 of 206 are 99.02 pct identical to residues 1 to 206 of 206 from Escherichia coli K-12 Strain MG1655: B2513.
      
 0.710
yciN
Orf, hypothetical protein; Residues 1 to 83 of 83 are 100.00 pct identical to residues 1 to 83 of 83 from Escherichia coli K-12 Strain MG1655: B1273.
  
     0.704
wecF
TDP-Fuc4NAc:lipidII transferase; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.
  
     0.684
lpp
Murein lipoprotein; A highly abundant outer membrane lipoprotein that controls the distance between the inner and outer membranes. The only protein known to be covalently linked to the peptidoglycan network (PGN). Also non-covalently binds the PGN. The link between the cell outer membrane and PGN contributes to maintenance of the structural and functional integrity of the cell envelope, and maintains the correct distance between the PGN and the outer membrane.
  
     0.683
yajG
Hypothetical protein; Residues 1 to 226 of 226 are 99.55 pct identical to residues 1 to 226 of 226 from Escherichia coli K-12 Strain MG1655: B0434.
  
     0.679
crl
Transcriptional regulator of cryptic csgA gene for curli surface fibers; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family.
  
     0.674
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.