STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybbYPutative transport; Residues 1 to 435 of 435 are 100.00 pct identical to residues 1 to 435 of 435 from Escherichia coli K-12 Strain MG1655: B0513. (435 aa)    
Predicted Functional Partners:
ybbZ
Orf, hypothetical protein; Residues 1 to 381 of 381 are 98.16 pct identical to residues 1 to 381 of 381 from Escherichia coli K-12 Strain MG1655: B0514; Belongs to the glycerate kinase type-1 family.
  
 
 0.952
ybbW
Hypothetical protein; Residues 48 to 463 of 463 are 98.79 pct identical to residues 1 to 416 of 437 from Escherichia coli K-12 Strain MG1655: B0511.
 
  
 0.906
ygfO
Putative transport protein; Specific, proton motive force-dependent high-affinity transporter for xanthine; Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily.
  
   
 0.860
ygfU
Putative permease; Residues 1 to 505 of 505 are 99.60 pct identical to residues 1 to 505 of 505 from Escherichia coli K-12 Strain MG1655: B2888.
  
   
 0.860
Z0666
Hypothetical protein; Residues 1 to 296 of 296 are 99.32 pct identical to residues 1 to 296 of 453 from Escherichia coli K-12 Strain MG1655: B0512.
 
  
 0.851
Z0667
Hypothetical protein; Residues 1 to 154 of 154 are 98.05 pct identical to residues 300 to 453 of 453 from Escherichia coli K-12 Strain MG1655: B0512.
 
  
 0.847
ghxQ
Hypothetical protein; Residues 6 to 455 of 455 are 82.44 pct identical to residues 1 to 449 of 449 from Escherichia coli K-12 Strain MG1655: B4064.
  
  
 0.817
gip
Glyoxylate-induced protein; Residues 1 to 258 of 258 are 99.22 pct identical to residues 1 to 258 of 258 from Escherichia coli K-12 Strain MG1655: B0508; Belongs to the hyi family.
  
  
 0.758
ybeS
Putative enzyme of polynucleotide modification; Residues 1 to 475 of 475 are 97.05 pct identical to residues 1 to 475 of 475 from Escherichia coli K-12 Strain MG1655: B0646.
  
     0.735
yjfK
Orf, hypothetical protein; Residues 1 to 219 of 219 are 98.17 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 Strain MG1655: B4183.
  
     0.718
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.