STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureCPutative urease structural subunit C (alpha); Residues 2 to 568 of 568 are 90.82 pct identical to residues 1 to 567 of 567 from GenPept 118 : gi|149338|gb|AAA25151.1| (M36068) urease subunit C [Klebsiella aerogenes]; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (568 aa)    
Predicted Functional Partners:
ureA
Putative urease structural subunit A (gamma); Residues 1 to 100 of 100 are 95.99 pct identical to residues 1 to 100 of 100 from GenPept 118 : gi|149336|gb|AAA25149.1| (M36068) urease subunit A [Klebsiella aerogenes]; Belongs to the urease gamma subunit family.
 0.999
ureB
Putative urease structural subunit B (beta); Residues 1 to 106 of 106 are 82.07 pct identical to residues 1 to 106 of 106 from GenPept 118 : gi|149337|gb|AAA25150.1| (M36068) urease subunit B [Klebsiella aerogenes]; Belongs to the urease beta subunit family.
 0.999
ureF
Putative urease accessory protein F; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 0.998
ureG
Putative urease accessory protein G; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 
 0.997
ureB_2
Putative urease structural subunit B (beta); Residues 1 to 106 of 106 are 82.07 pct identical to residues 1 to 106 of 106 from GenPept 118 : gi|149337|gb|AAA25150.1| (M36068) urease subunit B [Klebsiella aerogenes].
 
 0.995
ureD
Putative urease accessory protein D; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.993
ureA_2
Putative urease structural subunit A (gamma); Residues 1 to 100 of 100 are 95.99 pct identical to residues 1 to 100 of 100 from GenPept 118 : gi|149336|gb|AAA25149.1| (M36068) urease subunit A [Klebsiella aerogenes].
 
 0.992
ureE
Putative urease accessory protein E; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.963
ybbT
Orf, hypothetical protein; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the anaerobic utilization of allantoin as sole nitrogen source. Reinforces the induction of genes involved in the degradation of allantoin and glyoxylate by producing glyoxylate.
    
  0.901
ureG_2
Putative urease accessory protein G; Residues 1 to 205 of 205 are 90.24 pct identical to residues 1 to 205 of 205 from GenPept 118 : gi|149341|gb|AAA25154.1| (M36068) urease accessory protein G [Klebsiella aerogenes].
 
  
 0.889
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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