STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yihZOrf, hypothetical protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa)    
Predicted Functional Partners:
yiiD
Putative acetyltransferase; Residues 1 to 329 of 329 are 100.00 pct identical to residues 1 to 329 of 329 from Escherichia coli K-12 Strain MG1655: B3888.
  
  
 0.859
rbn
tRNA processing exoribonuclease BN; Residues 1 to 290 of 290 are 100.00 pct identical to residues 1 to 290 of 290 from Escherichia coli K-12 Strain MG1655: B3886.
  
    0.801
yihX
Putative phosphatase; Residues 1 to 206 of 206 are 99.02 pct identical to residues 1 to 206 of 206 from Escherichia coli K-12 Strain MG1655: B3885.
  
    0.794
yihV
Putative kinase; Phosphorylates 6-deoxy-6-sulfo-D-fructose (SF) to 6-deoxy-6- sulfo-D-fructose 1-phosphate (SFP); Belongs to the carbohydrate kinase PfkB family.
       0.559
yihW
Putative DEOR-type transcriptional activator; Residues 1 to 269 of 269 are 99.62 pct identical to residues 1 to 269 of 269 from Escherichia coli K-12 Strain MG1655: B3884.
       0.558
Z5428
Hypothetical protein; No significant matches.
       0.403
Z5429
Hypothetical protein; No significant matches.
       0.403
Your Current Organism:
Escherichia coli O157H7 EDL933
NCBI taxonomy Id: 155864
Other names: E. coli O157:H7 str. EDL933, Escherichia coli O157:H7 EDL933, Escherichia coli O157:H7 str. EDL933, Escherichia coli O157:H7 strain EDL933
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