Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ECs1940 | ECs1941 | gene:10364956 | gene:10364957 | Hypothetical protein; Similar to B1355_ECOLI gi|1787618 percent identity 98 in 59 aa (Conserved in E.coli K-12). | Putative transcriptional regulator; Probable regulator,weakly similar to regulatory proteins e.g. regulatory protein CI (235 aa) [Bacteriophage HK022] gi|1350835|sp|P18680 percent identity 42 in 66 aa. | 0.425 |
ECs1941 | ECs1940 | gene:10364957 | gene:10364956 | Putative transcriptional regulator; Probable regulator,weakly similar to regulatory proteins e.g. regulatory protein CI (235 aa) [Bacteriophage HK022] gi|1350835|sp|P18680 percent identity 42 in 66 aa. | Hypothetical protein; Similar to B1355_ECOLI gi|1787618 percent identity 98 in 59 aa (Conserved in E.coli K-12). | 0.425 |