STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs2488Glyceraldehyde-3-phosphate dehydrogenase A; Similar to GAPA_ECOLI gi|1788079 percent identity 100 in 331 aa (Conserved in E.coli K-12). (331 aa)    
Predicted Functional Partners:
ECs4844
Triosephosphate isomerase; Similar to TPIA_ECOLI gi|1790353 percent identity 100 in 255 aa (Conserved in E.coli K-12).
 0.998
ECs3797
Phosphoglycerate kinase; Similar to PGK_ECOLI gi|1789294 percent identity 99 in 387 aa (Conserved in E.coli K-12).
 
 0.997
ECs3796
Fructose-bisphosphate aldolase class II; Similar to FBA_ECOLI gi|1789293 percent identity 100 in 359 aa (Conserved in E.coli K-12).
  
 0.991
ECs5008
Glucosephosphate isomerase; Similar to PGI_ECOLI gi|1790457 percent identity 100 in 549 aa (Conserved in E.coli K-12).
 
 
 0.986
ECs3639
Enolase; Similar to ENO_ECOLI gi|1789141 percent identity 100 in 432 aa (Conserved in E.coli K-12).
 
 
 0.966
ECs4109
Malate dehydrogenase; Similar to MDH_ECOLI gi|1789632 percent identity 100 in 312 aa (Conserved in E.coli K-12).
 
 
 0.943
ECs5069
Probable aldolase,similar to aldolases e.g. fructose-bisphosphate aldolase (EC 4.1.2.13) FbaA [Bacillus subtilis] gi|543796|sp|P13243|ALF1_BACSU percent identity 41 in 286 aa.
  
 0.936
ECs2900
Hypothetical protein; Similar to B2097_ECOLI gi|1788414 percent identity 100 in 374 aa (Conserved in E.coli K-12).
    
 0.913
ECs2022
Glyceraldehyde 3-phosphate dehydrogenase C; Similar to G3P3_ECOLI sp|P33898 percent identity 97 in 333 aa.
  
  
 
0.907
ECs0846
Unknown,similar to hypothetical protein [Salmonella typhimurium LT2] gi|6960367|gb|AAF33527.1| percent identity 55 in 314 aa.
     
  0.900
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.