STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3290Pyridoxal/pyridoxine/pyridoxamine kinase; Similar to PDXK_ECOLI gi|1788758 percent identity 98 in 283 aa (Conserved in E.coli K-12). (283 aa)    
Predicted Functional Partners:
ECs2347
Pyridoxinephosphate oxidase; Similar to PDXH_ECOLI gi|1787926 percent identity 99 in 218 aa (Conserved in E.coli K-12).
    
 0.980
ECs2008
Putative dehydrogenase; Similar to YDBC_ECOLI gi|1787674 percent identity 98 in 286 aa (Conserved in E.coli K-12).
     
 0.960
ECs3430
Pyridoxine biosynthesis; Similar to PDXJ_ECOLI gi|1788917 percent identity 100 in 243 aa (Conserved in E.coli K-12).
     
 0.927
ECs2345
Pyridoxal kinase 2 / pyridoxine kinase; Similar to PDXY_ECOLI gi|1787924 percent identity 99 in 287 aa (Conserved in E.coli K-12).
  
  
0.924
ECs2906
Phosphomethylpyrimidine kinase; Similar to THID_ECOLI gi|1788420 percent identity 99 in 266 aa (Conserved in E.coli K-12).
  
 
 0.632
ECs3291
Hypothetical protein; Similar to YFEK_ECOLI gi|1788759 percent identity 97 in 107 aa but differs at C-ter, GTG start.
 
     0.599
ECs3826
Hypothetical protein; Similar to YGGS_ECOLI gi|1789321 percent identity 100 in 234 aa (Conserved in E.coli K-12).
  
  
 0.482
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.