STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3542High-affinity glycine betaine / proline transport system protein; Similar to PROX_ECOLI gi|1789034 percent identity 100 in 330 aa (Conserved in E.coli K-12). (330 aa)    
Predicted Functional Partners:
ECs3540
ATP-binding component of glycine betaine / proline transport system; Similar to PROV_ECOLI gi|1789032 percent identity 99 in 400 aa (Conserved in E.coli K-12).
 
 0.999
ECs3541
High-affinity glycine betaine / proline transport system protein; Similar to PROW_ECOLI gi|1789033 percent identity 99 in 354 aa (Conserved in E.coli K-12).
 
 0.999
ECs4142
Putative transport system permease protein; Similar to YHDX_ECOLI gi|1789669 percent identity 99 in 364 aa but differs at C-ter (Conserved in E.coli K-12).
  
  
  0.738
ECs4073
Hypothetical protein; Similar to YRBE_ECOLI gi|1789585 percent identity 100 in 260 aa (Conserved in E.coli K-12).
     
 0.736
ECs3018
Putative transport system permease protein; Similar to YEHZ_ECOLI gi|1788452 percent identity 96 in 305 aa (Conserved in E.coli K-12).
   
 
 0.724
ECs4143
Putative transport system permease protein; Similar to YHDY_ECOLI gi|1789671 percent identity 98 in 368 aa (Conserved in E.coli K-12).
  
  
 0.710
ECs0935
ATP-binding component of putrescine transport system; Similar to POTG_ECOLI gi|1787079 percent identity 99 in 377 aa but differs at N-ter, GTG start (Conserved in E.coli K-12).
    
 0.698
ECs1571
ATP-binding component of spermidine/putrescine transport; Similar to POTA_ECOLI gi|1787370 percent identity 100 in 378 aa (Conserved in E.coli K-12).
    
 0.698
ECs0788
ATP-binding component of molybdate transport system; Similar to MODF_ECOLI gi|1786975 percent identity 99 in 489 aa (Conserved in E.coli K-12).
  
  
  0.695
ECs2045
Putative ATP-binding component of a transport system; Similar to B1441_ECOLI gi|1787712 percent identity 99 in 337 aa (Conserved in E.coli K-12).
    
 0.668
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.