STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs3556Similar to RECA_ECOLI gi|1789051 percent identity 100 in 353 aa (Conserved in E.coli K-12). (353 aa)    
Predicted Functional Partners:
ECs1678
Similar to UMUD_ECOLI gi|1787431 percent identity 100 in 139 aa (Conserved in E.coli K-12).
  
 0.999
ECs3555
Regulatory protein OraA; Similar to ORAA_ECOLI gi|1789050 percent identity 99 in 166 aa (Conserved in E.coli K-12).
  
 
 0.990
ECs5026
Regulator for SOS regulon; Similar to LEXA_ECOLI gi|1790476 percent identity 100 in 202 aa (Conserved in E.coli K-12).
  
 0.988
ECs4786
DNA polymerase I; Similar to POLA_ECOLI gi|1790294 percent identity 99 in 928 aa (Conserved in E.coli K-12).
 
 0.987
ECs1679
Similar to UMUC_ECOLI gi|1787432 percent identity 99 in 422 aa (Conserved in E.coli K-12).
  
 0.963
ECs4636
DNA polymerase III beta-subunit; Similar to DNAN_ECOLI gi|1790136 percent identity 100 in 366 aa (Conserved in E.coli K-12).
   
 0.949
ECs1439
Damage-inducible protein DinI; Similar to DINI_ECOLI gi|1787300 percent identity 100 in 81 aa (Conserved in E.coli K-12).
   
 
 0.946
ECs4743
DNA-dependent ATPase I and helicase II; Similar to UVRD_ECOLI gi|2367296 percent identity 99 in 720 aa (Conserved in E.coli K-12).
 
 
 0.946
ECs5347
Probable ATP-dependent protease; Similar to SMS_ECOLI gi|1790850 percent identity 99 in 460 aa (Conserved in E.coli K-12).
   
  
 0.943
ECs4752
ATP-dependent DNA helicase; Similar to RECQ_ECOLI gi|2367301 percent identity 99 in 611 aa (Conserved in E.coli K-12).
   
 0.936
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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