STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs418050S ribosomal subunit protein L22; Similar to RPLV_ECOLI gi|1789711 percent identity 100 in 110 aa (Conserved in E.coli K-12). (110 aa)    
Predicted Functional Partners:
ECs3644
(p)ppGpp synthetase I; Similar to RELA_ECOLI gi|1789147 percent identity 100 in 744 aa (Conserved in E.coli K-12).
    
   0.999
ECs4104
50S ribosomal subunit protein L13; Similar to RPLM_ECOLI gi|1789626 percent identity 100 in 142 aa (Conserved in E.coli K-12).
 
 0.999
ECs4166
50S ribosomal subunit protein L15; Similar to RPLO_ECOLI gi|1789697 percent identity 99 in 144 aa (Conserved in E.coli K-12).
 
 0.999
ECs4168
30S ribosomal subunit protein S5; Similar to RPSE_ECOLI gi|1789699 percent identity 100 in 167 aa (Conserved in E.coli K-12).
 
 0.999
ECs4169
50S ribosomal subunit protein L18; Similar to RPLR_ECOLI gi|1789700 percent identity 100 in 117 aa (Conserved in E.coli K-12).
 
 0.999
ECs4170
50S ribosomal subunit protein L6; Similar to RPLF_ECOLI gi|1789701 percent identity 100 in 177 aa (Conserved in E.coli K-12).
 
 0.999
ECs4171
30S ribosomal subunit protein S8; Similar to RPSH_ECOLI gi|1789702 percent identity 100 in 130 aa (Conserved in E.coli K-12).
 
 0.999
ECs4178
50S ribosomal subunit protein L16; Similar to RPLP_ECOLI gi|1789709 percent identity 100 in 136 aa (Conserved in E.coli K-12).
 
 0.999
ECs4179
30S ribosomal subunit protein S3; Similar to RPSC_ECOLI gi|1789710 percent identity 100 in 233 aa (Conserved in E.coli K-12).
 
 0.999
ECs4181
30S ribosomal subunit protein S19; Similar to RPSS_ECOLI gi|1789712 percent identity 100 in 92 aa (Conserved in E.coli K-12).
 
 0.999
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.