STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs464060 KD inner-membrane protein; Similar to YIDC_ECOLI gi|1790140 percent identity 99 in 548 aa (Conserved in E.coli K-12). (548 aa)    
Predicted Functional Partners:
ECs0102
Preprotein translocase SecA; Similar to SECA_ECOLI gi|1786287 percent identity 99 in 901 aa (Conserved in E.coli K-12).
 
 
 0.999
ECs0458
Hypothetical protein; Similar to YAJC_ECOLI gi|1786608 percent identity 100 in 110 aa (Conserved in E.coli K-12).
  
 
 0.999
ECs0459
Protein-export membrane protein SecD; Similar to SECD_ECOLI gi|1786609 percent identity 99 in 615 aa (Conserved in E.coli K-12).
  
 0.999
ECs4054
Protein-export protein SecG; Similar to SECG_ECOLI gi|1789565 percent identity 100 in 110 aa (Conserved in E.coli K-12).
  
 0.999
ECs4165
Putative ATPase subunit of translocase; Similar to PRLA_ECOLI gi|1789696 percent identity 100 in 443 aa (Conserved in E.coli K-12).
  
 0.999
ECs4904
Preprotein translocase; Similar to SECE_ECOLI gi|1790413 percent identity 100 in 127 aa (Conserved in E.coli K-12).
  
 0.999
ECs0460
Protein-export membrane protein secF; Similar to SECF_ECOLI gi|1786610 percent identity 99 in 323 aa (Conserved in E.coli K-12).
   
 0.997
ECs3473
Signal recognition particle protein Ffh; Similar to FFH_ECOLI gi|1788963 percent identity 100 in 453 aa (Conserved in E.coli K-12).
   
 0.987
ECs4313
Cell division membrane protein; Similar to FTSY_ECOLI gi|1789874 percent identity 98 in 498 aa (Conserved in E.coli K-12).
   
 
 0.986
ECs4487
Protein export protein SecB; Similar to SECB_ECOLI gi|1790038 percent identity 100 in 155 aa (Conserved in E.coli K-12).
  
  
 0.986
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.