STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs4828Hypothetical protein; Similar to YIIL_ECOLI gi|1790335 percent identity 97 in 104 aa (Conserved in E.coli K-12). (104 aa)    
Predicted Functional Partners:
ECs4830
L-rhamnose isomerase; Similar to RHAA_ECOLI gi|1790337 percent identity 98 in 419 aa (Conserved in E.coli K-12).
 
 
 0.997
ECs4831
Rhamnulokinase; Similar to RHAB_ECOLI gi|1790338 percent identity 99 in 489 aa (Conserved in E.coli K-12).
 
  
 0.968
ECs4829
Rhamnulose-phosphate aldolase; Similar to RHAD_ECOLI gi|1790336 percent identity 98 in 274 aa (Conserved in E.coli K-12).
 
  
 0.953
ECs3135
Putative racemase; Similar to B2247_ECOLI gi|1788580 percent identity 99 in 405 aa (Conserved in E.coli K-12).
     
 0.645
ECs2118
Putative kinase; Similar to YDEV_ECOLI gi|1787789 percent identity 99 in 530 aa (Conserved in E.coli K-12).
  
  
 0.549
ECs3632
Putative kinase; Similar to YGCE_ECOLI gi|1789138 percent identity 98 in 492 aa (Conserved in E.coli K-12).
  
  
 0.549
ECs3663
L-fuculokinase; Similar to FUCK_ECOLI gi|1789168 percent identity 99 in 482 aa (Conserved in E.coli K-12).
  
  
 0.549
ECs4353
Probable sugar kinase,similar to sugar kinases e.g. xylulokinase (EC 2.7.1.17) [Lactobacillus pentosus] gi|139850|sp|P21939|XYLB_LACPE percent identity 23 in 496 aa.
  
  
 0.549
ECs4447
Xylulokinase; Similar to XYLB_ECOLI gi|1789987 percent identity 99 in 484 aa (Conserved in E.coli K-12).
  
  
 0.549
ECs0925
Putative DEOR-type transcriptional regulator; Similar to B0845_ECOLI gi|1787068 percent identity 99 in 402 aa (Conserved in E.coli K-12).
  
  
 0.544
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.