STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECs53262-component transcriptional regulator; Similar to BGLJ_ECOLI gi|1790828 percent identity 100 in 225 aa (Conserved in E.coli K-12). (225 aa)    
Predicted Functional Partners:
ECs5325
Putative regulator; Similar to YJJQ_ECOLI gi|1790827 percent identity 100 in 241 aa (Conserved in E.coli K-12).
 
   
 0.990
ECs3646
Sensor-regulator protein barA; Similar to BARA_ECOLI gi|1789149 percent identity 100 in 918 aa (Conserved in E.coli K-12).
  
 
 0.873
ECs0080
Putative transcriptional activator for leuABCD operon; Similar to LEUO_ECOLI (373 aa) gi|1786264 percent identity 99 in 314 aa but differs at N-ter, GTG start (Conserved in E.coli K-12).
  
  
 0.853
ECs0324
Putative regulator; Similar to YKGK_ECOLI gi|2367106 percent identity 95 in 196 aa (Conserved in E.coli K-12).
   
 
 0.838
ECs3106
Positive response regulator for colanic capsule biosynthesis; Similar to RCSB_ECOLI gi|1788546 percent identity 100 in 216 aa (Conserved in E.coli K-12).
  
 
 
0.826
ECs3105
Putative 2-component sensor protein; Similar to YOJN_ECOLI gi|1788545 percent identity 99 in 890 aa (Conserved in E.coli K-12).
 
 
 
 0.773
ECs3249
Putative sensor for regulator EvgA; Similar to EVGS_ECOLI gi|1788713 percent identity 97 in 1197 aa (Conserved in E.coli K-12).
   
 
 0.772
ECs5234
Hypothetical protein; Similar to part (5-393 in 393 aa)of YJGN_ECOLI gi|2367367 percent identity 96 in 389 aa (Conserved in E.coli K-12).
  
     0.729
ECs1148
Sensor protein torS; Similar to TORS_ECOLI gi|1787227 percent identity 97 in 904 aa (Conserved in E.coli K-12).
 
 
 
 0.721
ECs4089
Aerobic respiration sensor-response protein; Similar to ARCB_ECOLI gi|1789603 percent identity 99 in 778 aa (Conserved in E.coli K-12).
   
 
 0.720
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.