STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG53832.1Glycine betaine/proline transport system ATP-binding protein. (399 aa)    
Predicted Functional Partners:
SDG53881.1
Glycine betaine/proline transport system permease protein.
 0.999
SDG53917.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.995
SDH34096.1
Glycine betaine/proline transport system permease protein.
 0.993
SDG52380.1
Glycine betaine/proline transport system substrate-binding protein.
 0.990
SDH34155.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.969
SDG94885.1
ATP-binding cassette, subfamily B, HlyB/CyaB/ATP-binding cassette, subfamily C, LapB.
 
     
0.875
SDG65420.1
Dipeptide transport system permease protein.
 
      0.868
SDG55965.1
Peptide/nickel transport system permease protein.
 
      0.777
SDG73474.1
ATP-binding cassette, subfamily C, CydC.
 
    
0.774
SDH89332.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    
 0.769
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.