Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG54518.1 | SDG54544.1 | SAMN05421742_101531 | SAMN05421742_101532 | Methyltransferase domain-containing protein. | Methyltransferase, FkbM family. | 0.809 |
SDG54518.1 | SDH23882.1 | SAMN05421742_101531 | SAMN05421742_10593 | Methyltransferase domain-containing protein. | PAS domain S-box-containing protein. | 0.527 |
SDG54518.1 | SDH35282.1 | SAMN05421742_101531 | SAMN05421742_10693 | Methyltransferase domain-containing protein. | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | 0.498 |
SDG54544.1 | SDG54518.1 | SAMN05421742_101532 | SAMN05421742_101531 | Methyltransferase, FkbM family. | Methyltransferase domain-containing protein. | 0.809 |
SDG54544.1 | SDG75744.1 | SAMN05421742_101532 | SAMN05421742_102328 | Methyltransferase, FkbM family. | Ankyrin repeat. | 0.823 |
SDG54544.1 | SDH23882.1 | SAMN05421742_101532 | SAMN05421742_10593 | Methyltransferase, FkbM family. | PAS domain S-box-containing protein. | 0.781 |
SDG54544.1 | SDH35282.1 | SAMN05421742_101532 | SAMN05421742_10693 | Methyltransferase, FkbM family. | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | 0.824 |
SDG54544.1 | SDH45914.1 | SAMN05421742_101532 | SAMN05421742_10728 | Methyltransferase, FkbM family. | Hypothetical protein. | 0.854 |
SDG54544.1 | SDH66202.1 | SAMN05421742_101532 | SAMN05421742_10969 | Methyltransferase, FkbM family. | PAS domain S-box-containing protein. | 0.833 |
SDG54544.1 | SDH77125.1 | SAMN05421742_101532 | SAMN05421742_11228 | Methyltransferase, FkbM family. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.777 |
SDG54544.1 | alaS | SAMN05421742_101532 | SAMN05421742_11417 | Methyltransferase, FkbM family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.856 |
SDG54544.1 | dnaK | SAMN05421742_101532 | SAMN05421742_11713 | Methyltransferase, FkbM family. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.819 |
SDG54544.1 | htpG | SAMN05421742_101532 | SAMN05421742_103103 | Methyltransferase, FkbM family. | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.856 |
SDG75744.1 | SDG54544.1 | SAMN05421742_102328 | SAMN05421742_101532 | Ankyrin repeat. | Methyltransferase, FkbM family. | 0.823 |
SDG75744.1 | SDH35282.1 | SAMN05421742_102328 | SAMN05421742_10693 | Ankyrin repeat. | Predicted O-linked N-acetylglucosamine transferase, SPINDLY family. | 0.449 |
SDG75744.1 | SDH45914.1 | SAMN05421742_102328 | SAMN05421742_10728 | Ankyrin repeat. | Hypothetical protein. | 0.975 |
SDG75744.1 | alaS | SAMN05421742_102328 | SAMN05421742_11417 | Ankyrin repeat. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.645 |
SDG75744.1 | dnaK | SAMN05421742_102328 | SAMN05421742_11713 | Ankyrin repeat. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.946 |
SDG75744.1 | htpG | SAMN05421742_102328 | SAMN05421742_103103 | Ankyrin repeat. | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.763 |
SDH23882.1 | SDG54518.1 | SAMN05421742_10593 | SAMN05421742_101531 | PAS domain S-box-containing protein. | Methyltransferase domain-containing protein. | 0.527 |
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