Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG55550.1 | SDG55628.1 | SAMN05421742_101562 | SAMN05421742_101564 | Hypothetical protein. | cation:H+ antiporter. | 0.581 |
SDG55550.1 | SDG55665.1 | SAMN05421742_101562 | SAMN05421742_101565 | Hypothetical protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.581 |
SDG55550.1 | SDG55698.1 | SAMN05421742_101562 | SAMN05421742_101566 | Hypothetical protein. | Dihydroneopterin aldolase. | 0.542 |
SDG55628.1 | SDG55550.1 | SAMN05421742_101564 | SAMN05421742_101562 | cation:H+ antiporter. | Hypothetical protein. | 0.581 |
SDG55628.1 | SDG55665.1 | SAMN05421742_101564 | SAMN05421742_101565 | cation:H+ antiporter. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.774 |
SDG55628.1 | SDG55698.1 | SAMN05421742_101564 | SAMN05421742_101566 | cation:H+ antiporter. | Dihydroneopterin aldolase. | 0.659 |
SDG55665.1 | SDG55550.1 | SAMN05421742_101565 | SAMN05421742_101562 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Hypothetical protein. | 0.581 |
SDG55665.1 | SDG55628.1 | SAMN05421742_101565 | SAMN05421742_101564 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | cation:H+ antiporter. | 0.774 |
SDG55665.1 | SDG55698.1 | SAMN05421742_101565 | SAMN05421742_101566 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Dihydroneopterin aldolase. | 0.798 |
SDG55698.1 | SDG55550.1 | SAMN05421742_101566 | SAMN05421742_101562 | Dihydroneopterin aldolase. | Hypothetical protein. | 0.542 |
SDG55698.1 | SDG55628.1 | SAMN05421742_101566 | SAMN05421742_101564 | Dihydroneopterin aldolase. | cation:H+ antiporter. | 0.659 |
SDG55698.1 | SDG55665.1 | SAMN05421742_101566 | SAMN05421742_101565 | Dihydroneopterin aldolase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.798 |
SDG55698.1 | SDG85951.1 | SAMN05421742_101566 | SAMN05421742_10349 | Dihydroneopterin aldolase. | Dihydropteroate synthase. | 0.984 |
SDG55698.1 | SDG91640.1 | SAMN05421742_101566 | SAMN05421742_103193 | Dihydroneopterin aldolase. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.580 |
SDG55698.1 | SDG97538.1 | SAMN05421742_101566 | SAMN05421742_103346 | Dihydroneopterin aldolase. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | 0.985 |
SDG55698.1 | SDH69767.1 | SAMN05421742_101566 | SAMN05421742_11053 | Dihydroneopterin aldolase. | Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. | 0.870 |
SDG55698.1 | folE | SAMN05421742_101566 | SAMN05421742_10497 | Dihydroneopterin aldolase. | GTP cyclohydrolase I. | 0.978 |
SDG55698.1 | ftsH | SAMN05421742_101566 | SAMN05421742_10348 | Dihydroneopterin aldolase. | Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.608 |
SDG55698.1 | ispDF | SAMN05421742_101566 | SAMN05421742_103243 | Dihydroneopterin aldolase. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | 0.559 |
SDG85951.1 | SDG55698.1 | SAMN05421742_10349 | SAMN05421742_101566 | Dihydropteroate synthase. | Dihydroneopterin aldolase. | 0.984 |
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