STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG55928.1Peptide/nickel transport system permease protein. (325 aa)    
Predicted Functional Partners:
SDG55965.1
Peptide/nickel transport system permease protein.
 
 0.995
SDG55897.1
Peptide/nickel transport system substrate-binding protein.
 
 0.986
SDG65451.1
Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.985
SDG65420.1
Dipeptide transport system permease protein.
 
 0.977
SDG65489.1
Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.936
SDG77836.1
Microcin C transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.936
SDG65351.1
Dipeptide transport system substrate-binding protein.
 0.862
SDG77859.1
Microcin C transport system permease protein.
  
 0.825
SDG38008.1
Microcin C transport system substrate-binding protein.
 
 
 0.818
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.807
Your Current Organism:
Roseospirillum parvum
NCBI taxonomy Id: 83401
Other names: DSM 12498, R. parvum, Roseospirillum parvum Glaeser and Overmann 2001, strain 930I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.